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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Traes_4BL_80683C0B9.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 223aa MW: 25075.9 Da PI: 7.0889 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.4 | 2.3e-11 | 80 | 139 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + +rk +NR++A+rsR +++++ ++L+ ++++Le+ N+a++ + +++++ +++++ Traes_4BL_80683C0B9.1 80 ERQRKRKTSNRLSAQRSRMKRQQREDNLAARAAQLETDNEAMRVTTGLVQQQCSLVEQQN 139 4567999**********************************************9888876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.3E-10 | 76 | 138 | No hit | No description |
SMART | SM00338 | 1.3E-12 | 77 | 141 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-8 | 79 | 139 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.3 | 79 | 142 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.75E-8 | 81 | 136 | No hit | No description |
CDD | cd14702 | 3.98E-15 | 82 | 133 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 84 | 99 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
LLIQSIVVVV VCFLSFYVLV SVPCSSSGLQ VSTFSSAPST TSRSGNCLIR CVSXXXXXXX 60 XXXXXXXXXX XXXXXXTEEE RQRKRKTSNR LSAQRSRMKR QQREDNLAAR AAQLETDNEA 120 MRVTTGLVQQ QCSLVEQQNR VLSADARYLY SLLQQRNSQL RQLGELAGVP MDVQEIPVHL 180 TQLYGGLQTP PAPPLSFPPE IQMMFQPDQL DDIMDDAGSL PWL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 81 | 86 | QRKRKT |
2 | 94 | 99 | RSRMKR |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK250808 | 1e-147 | AK250808.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf88n03, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010228714.1 | 4e-38 | PREDICTED: bZIP transcription factor 53 | ||||
TrEMBL | W5E4Z3 | 1e-140 | W5E4Z3_WHEAT; Uncharacterized protein | ||||
STRING | MLOC_70302.1 | 8e-73 | (Hordeum vulgare) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12504 | 28 | 37 |
Publications ? help Back to Top | |||
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